Parantu Shah, Ph.D.
20 years of experience in cutting-edge of Bioinformatics and Genomics at devising storage solutions, methodology development, building high-throughput analysis environments, and integration and mining of functional- and oncogenomics data.
Expert in statistical modeling and machine learning from ultra-high dimensional biomedical and translational data including next-generation sequencing, microarray, Digital Pathology, Radiomics, RPPA, biomedical texts, DNA and protein sequences and 3D-structures. Demonstrated expertise in statistical modeling of data in high-dimensional settings, variable selection, survival modeling and patient stratification.
Education
MBA Candidate
2023, Questrom School of Business, Boston University, USA General MBA
Ph.D.
2005, European Molecular Biology Laboratory Heidelberg, Germany
- Joint degree with Universidad Autonoma de Madrid, Madrid, Spain
- Concentration: Information Extraction & Data mining from biomedical texts
- Advisor: Peer Bork & Director: Alfonso Valencia Visiting student at the National Institute of Informatics, Tokyo, Japan
- Laboratory PI: Nigel Collier
View Thesis
M. Sc. (by research)
2001, National Center for Biological Sciences, Bangalore, India
- Joint degree with Manipal Academy of Higher Education, Manipal, India
- Concentration: Protein Structural Bioinformatics
- Advisor: R. Sowdhamini
View Thesis
B.Sc. Honors
1998, he Maharaja SayajiRao University of Baroda, Vadodara, India
- Concentration: Chemistry with Physics and Mathematics
Technical Expertise
-
20 years of experience in cutting-edge of Bioinformatics and Genomics at devising storage solutions, methodology development, building high-throughput analysis environments, and integration and mining of functional- and oncogenomics data
-
Expert in generic (e.g. Python, Perl, C) and statistical (R, MATLAB) programming, database (mySQL, PostgreSQL) and web development (HTML, CSS and JavaScript), AWS infrastructure development and reproducible research (git, Rmarkdown, Jupyter).
-
Expert in statistical modeling and machine learning from ultra-high dimensional biomedical and translational data including next-generation sequencing, microarray, Digital Pathology, Radiomics, RPPA, biomedical texts, DNA and protein sequences and 3D-structures.
-
Demonstrated expertise in statistical modeling of data in high-dimensional settings, variable selection, survival modeling and patient stratification
Professional Experience
Additional Activities
Research
-
Participating in establishment of liquid biopsy, digital pathology/radiomics and lung immunotherapy platforms
-
Lead for development of indication agnostic signature from epigenetic biomarker signature with Oxford Biodynamics (data generation, overseeing analysis and interpretation, report & publications)
-
Lead for NCI collaboration for genomic biomarkers of response that determine immune function and safety signals
-
Part of first in industry collaboration between MD Anderson Apollo platform and EMD Serono that aims to carry out genomics aware, longitudinal data driven clinical trials of various EMD Serono assets.
-
Rotation project: development of Bintranfusp alpha trials in TNBC and Cervical cancers
-
Rotation project: development of a PCR based CDx assay for patient selection for TNBC trial with Qiagen
-
Identification and assessment of vendors/academic collaborators and due diligence
Publications
-
45. Oleksiewicz U et al., “KRAB/TRIM28 preserve self-renewal of human pluripotent stem cells through epigenetic repression of pro-differentiation genes” Stem Cell Reports 2017 17 30486-1.
-
44. Wiznerowicz M, Shah PK and Andersen, JN “Editorial” Contemp Oncol 2015 19(1A): A78-91.
-
43. Baniwal SK, Shah PK, Shi Y, Haduong JH, DeClerck YA, Gabet Y and Frenkel B, “Runx2 promotes both osteoblastogenesis and novel osteoclastogenic signals in ST2 mesenchymal progenitor cells” Osteoporosis International 2011.
Conference Proceedings
-
Mrowiec et al., “Digital pathology to evaluate PD-L1 IHC scoring as a predictor of outcome with second-line avelumab treatment in patients with non-small cell lung cancer”. ASCO 2020
-
Wolfe CM et al., “Enabling digital image analysis-based translational research with clinical legacy tissue scans” Submitted to ESDP 2020
-
Alimzhanov M et al., “Induction of immunogenic cell death and interferon signaling by Carboplatin and the ATR inhibitor M6620 may contribute to anti-tumor activity of M6620-Carboplatin-Avelumb triplet combination in MC38 tumor model” AACR 2020
-
Shah PK* et al, Development and validation of baseline predictive biomarkers for response to avelumab in second-line (2L) non-small cell lung cancer (NSCLC) Journal of ImmunoTherapy of Cancer SITC 2019
1xbet هو واحد من أكبر مواقع المراهنات في مصر.
Eğlenceli ve hızlı tempolu yapısıyla Aviator oyna, kullanıcıların dikkatini kısa sürede çeker.
Новые акции в Пинко казино появляются каждую неделю.
1win casino
Pinco Casino ve Bahis Sitesi Türkiye
Local players enjoy personalized bonuses when signing up with Glory Casino Bangladesh.
System bonusów i promocji na Mostbet jest atrakcyjny, oferując m.in. bonus powitalny i cashback.
Играйте в слоты на 1xbet и получайте кэшбэк на проигрыши.
В Кент казино можно играть как с компьютера, так и с телефона.
Hos udenlandske casinoer får du adgang til nye funktioner. Det gør spiloplevelsen spændende.
Übersicht der lizenzierten casinos ohne oasis 2025.
Osa pelaajista valitsee paras nettikasino maksutapojen monipuolisuuden perusteella.
pin up casino rəsmi saytı
Les meilleurs casinos en ligne proposent des plateformes mobiles optimisées pour jouer partout.
Läs mer om casino utan spelpaus — oberoende jämförelser och betyg.
Plinko CZ
Monet pitävät tärkeänä, että parhaat nettikasinot sisältävät laajan valikoiman arvostettuja pelintuottajia.
Pinco Casino ve Bahis Sitesi Türkiye
1xbet يحتوي على مجموعة كبيرة من ألعاب الكازينو.
Mostbet UZ foydalanuvchilariga qulay va tez tikish imkoniyatlarini taklif etadi.
Игровые автоматы Пинко казино работают круглосуточно.
تشتهر منصة 1xbet بسرعة الأداء وسهولة الاستخدام.
Le piattaforme emergenti investono molto per promuovere il miglior Plinko tra i loro giochi esclusivi.
Игроки ценят, что Пинко казино предлагает честные условия и прозрачные выплаты.
Новые акции в Пинко казино появляются каждую неделю.
Промокоды Mostbet помогут вам начать выигрывать сразу!
Gioca a Plinko casino e divertiti con il gioco piu emozionante della stagione!
Le funzioni extra rendono il Plinko live diverso da altri giochi arcade.
Fortgeschrittene Strategien für sportwetten ohne oasis mit Livewetten
Oplev den bedste spilleoplevelse på Casino uden ROFUS og få din chance for store præmier!
Geniş mərc imkanları təqdim etmək Mostbet üçün əsas üstünlükdür.
Le promo giornaliere includono i casino senza deposito stranieri non AAMS con vantaggi esclusivi.
пин ап казино
I casinò affidabili collocano il Plinko live nella sezione “Top giochi”.
pin up casino
Scegli i casino non AAMS migliori e gioca nei casino piu apprezzati d�Italia.
Local players enjoy personalized bonuses when signing up with Glory Casino Bangladesh.
Промокоды Mostbet предоставляют бонусы на первую ставку.
pin up casino
Real dilerl? oyuna baslamaq ucun Mostbet live kazinoya kec!
Start din rejse mod online lykke med glitchspin!
Ein wettanbieter ohne oasis ist ideal für spontane Wetten. So bleibt man flexibel.
Upptäck svenska casinon med neteller — bästa alternativen just nu.
pin up casino
Mobil istifadə rahatlığı üçün Pin Up indir faydalı olur.
Die Transparenz des Online Casino Schweiz überzeugt auch Kritiker.
Scopri i migliori casino non AAMS paysafecard dove puoi fare pagamenti rapidi e iniziare a giocare subito.
Le versioni mobili assicurano che il Plinko Go sia sempre accessibile.
Hər gün aktiv olanlar mostbet giriş üzərindən hesablarına daxil olur. Bu, cəmi bir neçə saniyə çəkir.
Gioca a Crazy Time Italia live e approfitta dei bonus esclusivi per i giocatori italiani!
Güvənli serverlər Aviator oyununda fasiləsiz xidmət təmin edir.
pin-up casino Azərbaycanda
pin up casino
Titkos stratégiák a befizetés nélküli bónusz – teljes útmutató
Sürətli ödəniş funksiyası Mostbet platformasının əsas üstünlüklərindəndir.
Sürətli ödəniş funksiyası Mostbet platformasının əsas üstünlüklərindəndir.
Sürətli ödəniş funksiyası Mostbet platformasının əsas üstünlüklərindəndir.
pin up casino AZ
Con RTP elevato, la Plinko XY app assicura trasparenza e sicurezza.
pin-up casino Azərbaycanda
Gioca a Plinko Sisal e ottieni premi straordinari! Clicca su Plinko Sisal per iniziare subito.
Şanslı numaralarınızı seçip Misty casino sayısal oyunlarında büyük ikramiyeyi kovalayın.
Beste Zahlungsmethoden im Umfeld von Sportwetten ohne OASIS – Praxisleitfaden
Legjobb bónuszok az online casino játékosai számára
Le promo giornaliere inseriscono lo Stake Plinko tra i giochi top.
Die Live-Stream-Qualität in einem Online Casino Paypal ist für heutige Standards überragend gut.
Non c’e bisogno di depositare soldi per giocare a Plinko! Ottieni il tuo Plinko bonus code no deposit e inizia subito a vincere.
I’m certain that Spinmeth will be your new favourite site.
Aviator oyununda proqnozlar ucun Pin Up ?n yaxs? al?tl?r? malikdir.
Slotlarda bedava dönüşler Misty casino (free spins) sayesinde cebinizden tek kuruş çıkmadan kazanabilirsiniz.
Ein moderner Look macht Vox casino zu einem echten Hingucker in der Branche.
In einem Online Casino Paysafe gibt es für deutsche Spieler meist keine geografischen Limits.
Os pagamentos simples tornam os casino online Portugal muito práticos.
Nas ágeis casas de apostas Portugal, a plataforma de live betting é o coração da experiência.
Türkiye’de online bahis Alev casino kalitesiyle çok daha eğlenceli bir hale dönüştü.
The graphics at real money online casino Canada are more realistic than ever before.
A facilidade de levantamento nos melhores casinos online é a prova final de que o casino é realmente honesto.
Les gains potentiels au casino online France sont affichés clairement sur chaque machine à sous.
Każde najlepsze kasyno online oferuje gry w formacie mobilnym na smartfony.
Finding a new real money online casino Canada is a rewarding experience.
Les jeux du casino online France sont accessibles sans téléchargement pour une rapidité d’accès maximale et immédiate.